SNP Profiles matching EQX 69

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 Key

 1234567891011121314
_Input profile
CTAACGTTTTCCTTTTCTCTAAGGCTAG
1._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
2._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
3._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
4._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
5._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
6._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
7._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
8._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
9._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
10._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
11._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
12._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
13._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
14._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
15._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
16._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
17._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
18._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
19._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
20._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
21._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
22._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
23._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
24._GC-08-069-1-91
CTAACGTTTTCCTTTTCTCTAAGGCTAG
25._EQX_69_[EQX]
CTAACGTTTTCCTTTTCTCTAAGGCTAG
26._GC-01-008-1-08
CTAACGTTTTCCTTTTCTCTAAGGCTAG
27._GC-08-069-1-91
CTAA_TT_CCTTTTCTCTAAGGCTAG
28._RUQ_100
_AACGTT___TT____CTAG
29._RUQ_100
CTAGCGTTTTCCTTTTCTCTAAGGCTAG
 1516171819202122232425262728
_Input profile
TTATGGCTCCCGGGAACTCCCGGTTTCC
1._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
2._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
3._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
4._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
5._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
6._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
7._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
8._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
9._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
10._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
11._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
12._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
13._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
14._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
15._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
16._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
17._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
18._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
19._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
20._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
21._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
22._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
23._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
24._GC-08-069-1-91
TT_GGCTCCCGGGAACTCCCGGTTTCC
25._EQX_69_[EQX]
TTATGGCTCCCGGGAACTCCCGGTTTCC
26._GC-01-008-1-08
TTATGGCTCCCGGGAACTCCCGGTTTCC
27._GC-08-069-1-91
TTATGGCTCCCGGGAACTCCCGGTTTCC
28._RUQ_100
____CCCGGG_CTCCCGGT-CC
29._RUQ_100
TTATGGCTCCCGGGAACTCCCGGTCTCC
 293031323334353637383940  
_Input profile
AGGGAACTAACCAACTGGCCATGGX_XX_X
1._EQX_69_[EQX]
AGGGAACTAACCAACTGGCCATGGX_XX_X
2._EQX_69_[EQX]
AGGGAACTAACCAACTGGCCATGGX_XX_X
3._EQX_69_[EQX]
AGGGAACTAACCAACTGGCCATGGX_XX_X
4._EQX_69_[EQX]
AGGGAACTAACCAACTGGCCATGGX_XX_X
5._EQX_69_[EQX]
AGGGAACTAACCAACTGGCCATGGX_XX_X
6._EQX_69_[EQX]
AGGGAACTAACCAACTGGCCATGGX_XX_X
7._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
8._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
9._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
10._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
11._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
12._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
13._GC-01-008-1-08
AGGGAACTAACCAACTGGCCATGGX_XX_X
14._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
15._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
16._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
17._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
18._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
19._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
20._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
21._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
22._EQX_69_[EQX]
_GGAACTAACCAACTGGCCATGGX_XX_X
23._GC-01-008-1-08
_GGAACTAACCAACTGGCCATGGX_XX_X
24._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
25._EQX_69_[EQX]
AGGGAACTAACC_CTGG_ATGGX_XX_X
26._GC-01-008-1-08
AGGGAACTAACC_CTGG_ATGGX_XX_X
27._GC-08-069-1-91
AGGGAACTAACCAACTGGCCATGGX_XX_X
28._RUQ_100
AG_AACTAACCAACTGGCC__X_XX_X
29._RUQ_100
AGAGAACTAACCAACTGGCCATGGX_XX_X

Input profile: EQX_69_[EQX]

 
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Mars Center for Cocoa Science, Brazil
Location: 1106 14 > F
 Dapeng Zhang, 2016

1._EQX_69_[EQX]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 7 > FP
 Dapeng Zhang, 2016

2._EQX_69_[EQX]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 10 > F
 Dapeng Zhang, 2016

3._EQX_69_[EQX]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 12
 Dapeng Zhang, 2016

4._EQX_69_[EQX]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 3
 Dapeng Zhang, 2016

5._EQX_69_[EQX]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 2
 Dapeng Zhang, 2016

6._EQX_69_[EQX]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

7._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

8._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

9._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018

11._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

12._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

13._EQX_69_[EQX] GC-01-008-1-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

14._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

15._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

16._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

17._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

18._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

19._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

20._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

21._EQX_78_[EQX] GC-08-069-1-91

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

22._EQX_69_[EQX]

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 16
 Dapeng Zhang, 2016

23._EQX_69_[EQX] GC-01-008-1-08

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

24._EQX_78_[EQX] GC-08-069-1-91

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

25._EQX_69_[EQX]

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1106 9 > FP
 Dapeng Zhang, 2016

26._EQX_69_[EQX] GC-01-008-1-08

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

27._EQX_78_[EQX] GC-08-069-1-91

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

28._EQX_69_[EQX] RUQ_100

identical
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

29._EQX_69_[EQX] RUQ_100

96.3 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25